Transition Metal-Catalyzed Reaction

Transition Metal-Catalyzed Reaction

Transition metal catalysis stands as a cornerstone in modern organic synthesis, enabling the construction of complex molecular architectures with high precision and efficiency. In drug discovery, the ability to rapidly form Carbon-Carbon (C-C) and Carbon-Heteroatom (C-X) bonds is essential for expanding chemical space and accelerating Structure-Activity Relationship (SAR) studies. BOC Sciences offers a comprehensive transition metal–catalyzed reaction service platform, leveraging Palladium (Pd), Nickel (Ni), Copper (Cu), and other metal systems to facilitate challenging transformations. From high-throughput catalyst screening (HTE) to gram-scale optimization, we assist medicinal chemists in overcoming synthetic bottlenecks, enabling the efficient synthesis of diverse scaffolds, heterocycles, and late-stage functionalized intermediates.

Transition Metal Catalysis Services

Catalyst Design & Screening

We utilize high-throughput experimentation to identify the optimal catalytic systems for your specific transformation:

  • Rapid Parallel Screening: 24/96-well micro-screening for rapid ligand and scavenger selection.
  • Ligand Engineering: Optimization of steric and electronic properties for homogeneous catalysis.
  • Heterogeneous & Nanocatalysts: Development of immobilized and nano-sized catalysts (<5 nm) for easy separation and recycling.
  • Custom Catalyst Development: Design of tailored catalyst architectures using supercritical fluid or sol-gel technologies.

Process Development & Optimization

Transitioning from medicinal chemistry to scalable processes with a focus on efficiency and safety:

  • Parameter Optimization: DoE-driven tuning of temperature, pressure, and solvent effects.
  • Scale-Up Capabilities: Seamless transfer from gram-scale laboratory synthesis to pilot plant production.
  • Reaction Kinetics: Detailed kinetic profiling to understand reaction mechanisms and rates.
  • Process Safety: Thermal hazard assessment and reaction calorimetry for safe scale-up.

Catalyst Characterization & Analysis

Comprehensive analytical support to validate catalyst structure, purity, and performance:

  • Solid-State Characterization: Advanced XRD, SEM, XPS, and TEM analysis for heterogeneous catalysts.
  • Performance Metrics: Rigorous testing of Turnover Frequency (TOF) and Turnover Number (TON).
  • Stability & Lifetime: Leaching studies (ICP-MS) and catalyst recyclability assessment.
  • Mechanistic Insight: In-situ monitoring and intermediate identification.
Overcoming Synthetic Hurdles?

BOC Sciences delivers expert solutions in Pd, Ni, and Cu catalysis to accelerate your medicinal chemistry programs.

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Advanced Catalytic Methodologies

Pd-Catalyzed Coupling

Palladium-Catalyzed Cross-Couplings

The gold standard for C-C bond formation. We possess extensive expertise in Suzuki-Miyaura, Stille, Negishi, and Sonogashira couplings, optimizing conditions to tolerate diverse functional groups found in pharmaceutical intermediates.

Buchwald-Hartwig Amination

C-N & C-O Bond Formation

Specializing in Buchwald-Hartwig amination and Ullmann-type couplings. We expertly handle the coupling of heteroaryl halides with amines, amides, and ethers, critical for constructing nitrogen-rich bioactive heterocycles.

Ni-Catalyzed Reactions

Nickel Catalysis & Photoredox

Harnessing the unique reactivity of Nickel for activation of stronger bonds (e.g., C-O, C-CN) and sp3-sp2 cross-couplings. We also integrate metallaphotoredox catalysis to access novel chemical space under mild conditions.

C-H Activation

C-H Activation

Direct functionalization of inert C-H bonds using Pd, Ir, or Rh catalysts. This atom-economical approach shortens synthetic routes by eliminating the need for pre-functionalized starting materials in scaffold synthesis.

Olefin Metathesis

Olefin Metathesis

Utilizing Ruthenium (Ru) and Molybdenum (Mo) alkylidenes for Ring-Closing Metathesis (RCM) and Cross-Metathesis (CM). Ideal for macrocyclization strategies in peptide mimetics and complex natural product synthesis.

Click Chemistry

Cu-Catalyzed "Click" Chemistry

Robust Copper-Catalyzed Azide-Alkyne Cycloaddition (CuAAC) for bio-orthogonal conjugation and fragment linking. We ensure complete conversion and minimal metal residue in the final conjugates.

Comprehensive Catalyst Portfolio

BOC Sciences maintains an extensive inventory of transition metal catalysts, classified by active metal center and catalytic architecture to meet diverse synthetic and processing requirements.

Precious Metal Catalysts

High-activity systems for critical bond formations and selectivity.

  • Palladium (Pd): Versatile cross-coupling benchmarks.
  • Ruthenium (Ru) & Rhodium (Rh): Metathesis and hydrogenation.
  • Iridium (Ir) & Gold (Au): C-H activation and unique π-acid catalysis.
  • Platinum (Pt): Robust oxidation and reduction catalysts.

Base Metals & Synergistic Systems

Sustainable, cost-effective alternatives with unique radical reactivity.

  • Base Transition Metals: Iron (Fe), Cobalt (Co), Nickel (Ni), Copper (Cu), Zinc (Zn).
  • Bi-/Multi-metallic Systems: Synergistic catalysts designed for tandem reactions or enhanced stability.
  • Earth-Abundant Options: Ideal for cost-sensitive large-scale manufacturing.

Catalytic Forms & Morphologies

Tailored physical forms for optimized kinetics and separation.

  • Homogeneous: Discrete metal complexes and organometallic compounds for maximum activity.
  • Heterogeneous: Supported catalysts on Carbon, Alumina (Al2O3), or Silica (SiO2) for easy filtration.
  • Nanocatalysis: Advanced magnetic nanocatalysts (Fe3O4, Co-based) enabling magnetic separation.

Accelerate Your Synthesis with Metal Catalysis

Submit your reaction requirements or target structures. Our process chemists will design a screening panel to unlock the optimal synthetic pathway.

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Service Workflow: From Screen to Scale

Retrosynthetic Analysis

1Route Assessment & Design

We evaluate the target structure and propose transition metal-catalyzed strategies. Catalyst and ligand selection is based on mechanistic insights and precedent literature.

High-Throughput Screening

2Condition Screening

Microscale parallel reactions are conducted to screen metals, ligands, bases, and solvents. HPLC/UPLC-MS analysis identifies the highest yielding conditions.

Optimization & Isolation

3Optimization & Synthesis

Conditions are refined for scalability. We perform the reaction on the required scale (mg to g) and utilize specialized purification techniques (e.g., metal scavenging).

Delivery

4Analysis & Delivery

Final products are characterized (NMR, LC-MS). We deliver the compound along with a detailed report on reaction conditions and purification protocols.

Catalytic Solutions for Drug Discovery

01

Difficult Bond Formations

We solve synthetic dead-ends where standard conditions fail. By employing advanced precatalysts (e.g., Pd-PEPPSI, Buchwald generations) and Ni-catalysis, we achieve coupling in deactivated or sterically congested systems essential for novel IP generation.

02

Rapid Analog Expansion (SAR)

Our parallel synthesis capabilities allow for the rapid "decoration" of core scaffolds. We efficiently couple a single core with dozens of diversity elements via Suzuki or Buchwald protocols, accelerating Hit-to-Lead cycles.

03

Macrocyclization Strategies

For projects involving PROTACs or cyclic peptides, we optimize Ring-Closing Metathesis (RCM) or intramolecular cross-couplings to form large rings, carefully controlling dilution and catalyst addition to minimize oligomerization.

04

Route Shortening via C-H Activation

We implement directed C-H functionalization strategies to introduce complexity at a late stage. This reduces step count and improves overall synthetic efficiency, providing faster access to final compounds for biological testing.

Unlock Efficiency with Expert Catalysis Services

Partner with BOC Sciences to leverage the power of Transition Metal Catalysis. From routine couplings to complex mechanistic puzzles, our chemistry team delivers the molecules you need to advance your pipeline.

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Why Choose Our Catalysis Platform?

Extensive Ligand Library

Access to a vast collection of phosphine, carbene (NHC), and bipyridine ligands, enabling rapid "mix-and-match" screening to find the perfect steric and electronic match for your reaction.

High-Throughput Capability

Our automated screening platforms allow us to evaluate hundreds of reaction conditions simultaneously, significantly reducing the time required to solve optimization problems.

Broad Metal Expertise

We are not limited to Palladium. Our team has deep expertise in Earth-abundant metal catalysis (Nickel, Copper, Iron), offering sustainable and cost-effective alternatives for scale-up considerations.

Problem-Solving Focus

We specialize in "failed reactions." Our chemists apply mechanistic understanding to troubleshoot catalyst poisoning, beta-hydride elimination, and other common failure modes.

Applications in Chemical R&D

Medicinal Chemistry

  • Lead Optimization
  • Diversity-Oriented Synthesis
  • Fragment-Based Drug Discovery
  • Bioisostere Installation

Process Chemistry Support

  • Catalyst Loading Reduction
  • Metal Scavenging Studies
  • Alternative Solvent Screening
  • Scalability Assessment

New Modalities

  • PROTACs Linker Synthesis
  • DNA-Encoded Libraries (DEL)
  • Peptide Modification
  • Macrocycle Construction

Case Studies: Solving Catalytic Challenges

Client Needs: Synthesis of a key intermediate involving the coupling of a bulky ortho-substituted aryl chloride with a secondary amine. Previous attempts resulted in low conversion and significant dehalogenation byproducts.

Challenges: The steric bulk around the reaction center impeded the oxidative addition of the Pd catalyst, while the electron-rich nature of the amine favored catalyst poisoning. Standard protocols (Pd(OAc)2/BINAP) failed to yield >10% product.

Solution: BOC Sciences leveraged its HTE platform to screen a matrix of sterically demanding biaryl phosphine ligands (Buchwald-type). We identified a specialized Pd-precatalyst system that facilitates difficult oxidative addition in congested environments, employing a weak inorganic base strategy to stabilize the active catalytic species and minimize hydrodehalogenation side pathways.

Outcome: Achieved >90% conversion with 85% isolated yield. The optimized condition was robust enough to be scaled up to 50 grams for the client's lead optimization studies.

Client Needs: Coupling of a secondary alkyl zinc reagent with a heteroaryl bromide to install a chiral alkyl chain on a pyridine core.

Challenges: Palladium catalysis was ineffective due to slow transmetallation and rapid beta-hydride elimination of the alkyl partner, leading to isomerization of the chiral center and alkene byproducts.

Solution: Drawing on our expertise in Earth-abundant metals, we engineered a Nickel/Pybox catalytic system that operates via a radical mechanism rather than a traditional polar pathway. This approach effectively suppressed beta-hydride elimination and accelerated the cross-coupling step, while careful ligand optimization maintained the stereochemical integrity of the sensitive alkyl partner.

Outcome: Delivered the target chiral compound with >98% ee and high yield. This route enabled the client to access a novel series of alkylated pyridine analogs previously considered inaccessible.

Client Needs: Formation of a 16-membered macrocycle for a kinase inhibitor project via Ring-Closing Metathesis (RCM).

Challenges: The precursor contained multiple basic nitrogen atoms coordinating to the Ruthenium catalyst, shutting down reactivity. Additionally, intermolecular dimerization was competing with the desired cyclization.

Solution: We developed a precision protocol using a modified Hoveyda-Grubbs catalyst coupled with in-situ acid protonation to mask the Lewis basic nitrogen sites, preventing catalyst poisoning. Furthermore, we implemented a controlled pseudo-high-dilution dosing strategy to kinetically favor the intramolecular cyclization over oligomerization, ensuring clean macrocycle formation.

Outcome: Successfully synthesized the macrocycle with 70% yield, significantly higher than the initial<5% observed. The method was successfully transferred to the client's internal team.

Frequently Asked Questions

Frequently Asked Questions

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Client Reviews: Chemical Synthesis Services

Expert Services Supporting Synthetic Reactions

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